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Immunomics Services

Microglia Protein Profiling by CyTOF

Microglia are the resident innate immune cells of the CNS and have an important role in maintaining CNS integrity and function. CD Genomics provides large-scale single-cell immunoassays of microglia (huMG) from different brain regions by CyTOF, allowing a detailed phenotypic description of huMG and distinguishing it from other innate immune cells, such as cells from blood and cerebrospinal fluid (CSF).

Introduction to Microglia

Microglia, the primary cells of immune surveillance in the brain, can present antigens to CD-4 positive T cells in a molecular context of MHC class II expression and are capable of Fc-mediated phagocytosis. By participating in the clearance of apoptotic neurons, microglia facilitate the refinement of synaptic connections and provide nutritional support for memory and motor learning. Additionally, microglia are involved in a variety of physiological and pathological processes in the brain by interacting with neurons and other glial cells and by producing bioactive substances such as growth factors and cytokines.

Applications of CyTOF in Microglia Protein Profiling

So far, common techniques for phenotypic characterization of huMG have included immunohistochemical analysis of brain tissue and in vitro culture of huMG. These methods are limited by the number of markers that can be investigated simultaneously in a single measurement. As a novel method to analyze microglia phenotypes, CyTOF not only shows antibody labeling on the cell surface but can also be used to study post-translational modifications of proteins, including protein phosphorylation in cell signaling.

  • Microglia Protein Profiling by CyTOF to Study Alzheimer's Disease
    The pathology of Alzheimer's disease (AD) triggers the activation of microglia. Microglia express many AD risk genes, suggesting that their response to AD pathology can influence disease progression. Taking advantage of CyTOF's high-dimensional proteomic analysis, specific subsets of reactive microglia associated with AD are identified with reduced expression of homeostatic checkpoint markers (Cx3cr1, MerTK, and Siglec-H) and increased expression of major histocompatibility complex (MHC)-class II (MHC-II), phagocytosis-related markers CD11c and CD14, as well as activation markers (CD86 and CD44) and programmed death ligand 1 (PDL1).

Fig.1 Heat map clusters show the expression levels of all 36 markers used for cluster analysis.Fig.1 Gene expression characteristics and biological functions of disease-associated microglia. (Wang, H.,2021)

Our Services

CyTOF, also known as mass spectrometry, is an advanced technique for detecting metal-bound cellular markers on the cell surface and inside the cell. The method uses the principle of inductively coupled plasma mass spectrometry for the detection of elemental materials in liquids. The technique is now being applied to immunological studies and the number of parameters in the detection panel has increased considerably.

CD Genomics provides microglia protein profiling services on customer-provided samples. We offer services such as isolation, processing, counting, staining, and fixation of cells.

  • Panel Design - Knowledge of metal ligation and antibody sensitivity/relative protein abundance is used to design each panel. All antibodies are validated by CyTOF using standard procedures after design and ligation.
  • Design Panel - Easily build panels with up to 40 metal-tagged antibodies or use pre-built panels to get started.
  • Advanced CyTOF System - Our advanced CyTOF mass spectrometry system can analyze multiple cell surface and intracellular markers without the spectral overlap of traditional flow cytometry.
  • Data Analysis - In addition to providing CyTOF's core services, we also provide professional data analysis services to help our clients resolve their experimental results.

Workflow of Microglia Protein Profiling by CyTOF

Fig.2 Workflow.

Why Choose Us

Based on many years of experience in single-cell analysis, CD Genomics is a reliable CyTOF and immunomics specialist. We are expanding the pipeline of assays available to help our customers advance their projects and obtain reliable data. Please contact us for more information.

Reference

  1. Wang, H. (2021). Microglia heterogeneity in Alzheimer's disease: insights from single-cell technologies. Frontiers in Synaptic Neuroscience, 13, 68.
! For research use only.